B2B eCommerce

B2B Invoicing and Customized B2B Payments for eCommerce

Updated November 28  |  3 min read
Key Takeaways
  • B2B eCommerce invoicing and processing payments involve the digital management of e-invoices and the facilitation of secure and efficient transactions between businesses.
  • It streamlines the financial aspect of B2B online sales by automating the generation and delivery of invoices, allowing for customization and real-time tracking.
  • Integrating payment gateways with B2B eCommerce platforms enhances the payment process by offering multiple secure payment options to buyers, ensuring timely and accurate transactions after they receive each B2B invoice.
  • This streamlined approach improves capital flow, reduces errors, and enhances overall efficiency in the B2B procurement process, providing a seamless experience for businesses engaging in B2B eCommerce.
Streamlining e invoicing on B2B website.

ECommerce and Payment Gateways

Selling is one of the primary functions of an eCommerce business. Successfully invoicing clients to ensure you receive payment is equally critical. B2B (business-to-business) electronic invoicing is essential to generate revenue, because a plethora of businesses require invoices in order to approve payments for goods and/or services.

You can sell your products online, but you truly aren't generating income until you receive payment. For many business owners, invoicing can prove to be quite confusing and customers missing payment deadlines is incredibly frustrating.

When executed correctly in any online setting, handling eCommerce with the option of electronic invoicing becomes simpler, removing the need for paper invoices.

At Clarity, we specialize in eCommerce invoicing, so keep reading to find out more about B2B online payments.

You can sell your products online, but you truly aren't generating income until you receive payment That’s the Clarity difference
E-Invoicing can help reduce failed payments.

Process Electronic Invoices Anytime, Anywhere

In 2014, speed was the name of the game. To be successful, you needed to deliver products and information to your customers by the click of a button. In order to be the fastest, you must have the capacity to take care of your business from anywhere. Since that's now an expectation, you need a solution that performs.

Clarity lets you process each B2B invoice offline, as well as online. Instead of sitting at your desktop approving orders and shipments, you can do this automatically. Not only does this cut the mouse cord, but this frees up more time to focus on your business.

When word spreads about how you offer quality products in a timely fashion, you will see a bump in sales. As advanced as the internet has made us, the basic human need for quality business referrals will always be present. Positive referrals will be sure to grow with efficient invoicing via a robust B2B payment processor.

E-Invoices lead to faster payments.

Keep Track of Every B2B Invoice and Payment

Understanding the real-time direction of your available funds is no simple task. Tools like QuickBooks, and other online accounting software, can help, but multiple challenges still arise. Integrating inventory management, invoice/payment systems, a B2B payment gateway, and eCommerce help solve this issue. This real-time business reporting allows decision-makers to identify their sales, margins, profits, and everything in between.

During tax season, Clarity eCommerce systems even allow you to track your income and tax collection for reporting purposes. Nothing is worse than running a successful business, only to have Uncle Sam unexpectedly scrape some off the top.

When and where to charge B2B sales tax is not easy, unless you let Clarity help automate a system for you. Not only can we set up tax collection for you, but Clarity is also a certified Avalara Sales Tax partner and can get you automated collections and reporting.

Improve Your Cash Flow

B2B inventory management software and invoice management allows you to send invoices for products and services rendered. With Clarity's help, you will know where you make money, areas for improvement, and how to steer your company moving forward. These advantages will help make your business an overnight success.

We help any small business or enterprise that comes our way. To learn more about Clarity and our sophisticated B2B eCommerce invoicing and payment systems, click the button below and get in touch.

Clarity integration for credit card payments and multiple payment methods.



B2B eCommerce invoicing and payments are crucial for several reasons. Firstly, they streamline financial transactions between businesses, reducing manual errors and improving the flow of funds. Efficient invoicing ensures timely and accurate billing, facilitating prompt digital payment and minimizing payment delays.

Second, B2B eCommerce invoicing and payments enhance transparency and accountability in business transactions, providing a clear record of purchases and financial obligations. This helps in building trust and strengthening business relationships. Integrating payment gateways with B2B eCommerce platforms offers secure payment processing and a variety of payment options, improving the overall buying experience for the end-consumer.

Ultimately, B2B eCommerce invoicing and payments optimize business operations, increase efficiency, and contribute to sustainable growth when paired with an efficient payment processor.


B2B invoicing plays a crucial role in supporting the business supply chain by streamlining and optimizing financial transactions between suppliers and buyers. It provides a clear and structured method for generating and managing invoices, ensuring accurate documentation of purchases, prices, and payment terms.

B2B invoicing helps in maintaining transparency and accountability throughout the supply chain, allowing businesses to track and reconcile payments, manage cash, and make informed decisions based on financial data.

By facilitating timely and efficient invoicing processes, B2B invoicing contributes to the smooth functioning of the supply chain, enhancing collaboration and trust between business partners.


E-invoicing significantly improves client payments for B2B eCommerce businesses. It expedites the invoicing process by enabling instantaneous delivery and receipt of invoices in electronic formats.

This reduces the likelihood of delays often associated with traditional paper-based invoices. Moreover, e-invoicing allows for automated payment reminders, ensuring clients are promptly notified of outstanding invoices. The structured digital format also minimizes errors, leading to smoother and faster processing.

Integration with accounting systems streamlines reconciliation of electric invoices, making it easier for clients to verify and process client payments. Additionally, e-invoicing provides a transparent audit trail, enhancing trust and accountability between businesses.

Ultimately, the efficiency gained from e-invoicing promotes timelier payments, improving cash flow and overall financial health for business-to-business eCommerce enterprises. This, in turn, cultivates stronger, more positive relationships with clients, leading to a more sustainable and prosperous business ecosystem.


Integrating a payment gateway with your B2B eCommerce platform typically involves the following steps.

Choose a payment gateway provider that is compatible with your platform and meets your business needs. Then, sign up for an account with the chosen payment gateway and obtain the necessary credentials. Access the administration panel or settings of your B2B eCommerce platform and locate the payment settings section. Enter the provided credentials and configure the payment gateway settings as required, including if you'll take eChecks, online money transfers, or even a wire transfer.

Test the integration thoroughly to ensure proper functionality. If needed, consult the documentation or support resources provided by your specific platform and payment gateway for detailed integration instructions.

E-invoicing, or electronic invoicing, is a digital method of generating, transmitting, and receiving invoices between businesses and their clients. Unlike traditional paper-based invoices, e-invoicing relies on structured data formats that allow for automated processing. It involves the use of standardized protocols to ensure uniformity and compatibility across different accounting systems.

E-invoices typically include essential information such as the sender and recipient details, itemized products or services, quantities, prices, and applicable taxes. By leveraging technology, e-invoicing streamlines the entire invoicing process, reducing manual errors, cutting down processing time, aiding prompt payment, and enhancing overall efficiency.

E-invoicing also facilitates seamless integration with accounting software, making it easier to track and manage financial transactions. This digital approach not only minimizes paper waste but also provides a more secure and transparent means of conducting business transactions, ultimately contributing to a more sustainable and cost-effective financial ecosystem.


Yes, many B2B eCommerce platforms have built-in features that allow for the automatic generation of invoices. These platforms enable businesses to set up templates with pre-defined fields, such as buyer and seller information, product details, pricing, and terms. When a purchase is made, the platform automatically populates the relevant information into the B2B invoice template, generating a complete and accurate invoice.

This automation not only saves time and effort but also reduces the risk of manual errors. Businesses can customize these B2B invoice templates to align with their branding and ensure professional and consistent invoicing for their B2B transactions.


Yes, B2B invoicing software can seamlessly integrate with ERP (Enterprise Resource Planning) or CRM (Customer Relationship Management) systems, streamlining business processes and enhancing overall efficiency. Integration enables the automated exchange of critical data between the invoicing software and the ERP or CRM platforms. This synchronization with B2B invoicing and ERP/CRM ensures real-time updates on financial transactions, customer information, and inventory levels, fostering accurate and up-to-date business insights.

By linking these ERPs, CRMs, and B2B invoicing systems, businesses can minimize manual data entry, reduce errors, enhance communication between departments, and streamline the payment process. This integrated approach facilitates a more cohesive and interconnected workflow, enabling organizations to manage invoicing, financials, and customer relationships in a unified and efficient manner, ultimately contributing to improved decision-making and operational excellence.


B2B eCommerce platforms can facilitate payment reconciliation by providing features such as real-time payment tracking, order history, and automated updates of invoice status. This simplifies the process of matching payments received with corresponding invoices, reducing manual effort and potential errors.

The integration process and available payment gateways may vary depending on the specific B2B eCommerce platform and payment gateway providers chosen. It's recommended to refer to the documentation and support resources provided by your specific platform and payment gateway for detailed instructions.

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